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med.micro - Microbiology Engine

10 organism profiles, MIC breakpoints (CLSI 2024), and empiric therapy protocols.

Organisms​

E.coli, Klebsiella, Pseudomonas, MRSA, MSSA, Enterococcus, VRE, Strep pneumo, C.diff, Candida

Methods​

get_organism(name) ? dict​

Get organism profile with Gram stain, morphology.

check_susceptibility(organism, antibiotic, mic) ? str​

Test MIC against CLSI breakpoints (S/I/R).

empiric_therapy(infection_type) ? dict​

Get empiric antibiotic recommendations for: CAP, UTI, sepsis, SSTI, meningitis.

gram_stain_ddx(gram, morphology) ? list​

Differential diagnosis from Gram stain result.

See Also​

  • med.pk — pharmacokinetic dosing after empiric therapy selection
  • med.lab — lab panels for infection markers (WBC, procalcitonin, CRP)
  • med.scores — qSOFA and SOFA for sepsis severity assessment